I have two cell lines (control and knockout) for which I have RNA-seq, ChIP-seq, TT-seq and other types of data (in total 8 variables) that I would like to integrate. All 8 sequencing experiments provide information for the same set of genes, although the type of information provided is different (levels of expression, levels of methylation, rate of transcription, etc).
- Can I use mixOmics to integrate my data?
- Should I apply a N-integrated approach? I am not sure about this since all my omic experiments provide info about the same set of genes (i.e. all the p or features are the same across all my matrices).
Thank you very much in advance.