Hi，Kimanh
I am using the mixOmics to analysis my data.
I got the correlation between variables by using the block.splsda , but I didn’t get the Pvalue of the correlation, and I haven’t find a function to compute the Pvalue for the correlation in the mixOmics.
Cherry
Hi Cherry,
our methods are multivariate, which means that we primarily focus on the whole signature, as a whole, rather than individual variables. This is why you will never see a p-value in mixOmics (we do however, like in the circosPlot show the associations between variables as a post-hoc visualisation after the analysis).
Feel free to conduct a cor.test() external to the package if you wish, but we do not provide such outputs.
Kim-Anh