Thanks for developing mixOmics. It is a really great tool and well documented.
I intended to perform an N-integration analysis of 10 post-translational modification(PTM) datasets using mixOmics. My queries are as follow:
To integrate 10 datasets(such as phosphorylation, acetylation, ubiquitination, succinylation, et al.), do you have any suggestions on how to perform the Tuning keepX step? In my case, the exponentially increasing number of variables resulted in too much calculation, and the Tuning process could not be completed.
When I performed circosPlot visualization, there seems to be a limit of no more than 6 colors for block display. Does it mean that I cannot directly export visualization results using mixOmics?