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Genotype-phenotype modeling with longitudinal imaging data
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|
1
|
66
|
October 18, 2020
|
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Methylation data processing
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|
0
|
26
|
October 18, 2020
|
|
Multi-timepoint integration analysis
|
|
1
|
69
|
October 18, 2020
|
|
Using keep.X from separate sPLS-DA analyses for Diablo
|
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3
|
72
|
October 8, 2020
|
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sPLS choice of optimal number of components
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|
2
|
73
|
September 30, 2020
|
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Integration with genotype data
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|
3
|
141
|
September 24, 2020
|
|
How are the plotVar coordinates (correlation circle plot) calculated?
|
|
5
|
147
|
September 22, 2020
|
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Unexpected result in plotVar comparatively to the optimized sPLS I performed
|
|
1
|
45
|
September 22, 2020
|
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High error rate even when more components are included in sPLS-DA
|
|
1
|
54
|
September 22, 2020
|
|
PLS-da on DNA-methylation data
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|
2
|
49
|
September 14, 2020
|
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sPLS-DA model for repeated longitudinal measurements
|
|
1
|
83
|
September 13, 2020
|
|
How to tune (block) sPLS-DA to select all the variable discriminating groups?
|
|
1
|
66
|
September 13, 2020
|
|
Stuck with a PCA code in mixOmics
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|
2
|
55
|
September 7, 2020
|
|
Splsda error rate
|
|
1
|
85
|
September 7, 2020
|
|
sPLS with X and Y matrix
|
|
1
|
84
|
September 7, 2020
|
|
Loadings vs. VIP
|
|
5
|
314
|
August 14, 2020
|
|
Is it possible to integrate the correlation matrix within the single omic data into the Diablo?
|
|
1
|
48
|
August 13, 2020
|
|
Sample size for PLS and DIABLO
|
|
1
|
101
|
August 13, 2020
|
|
Q2.total negative in perf.pls
|
|
10
|
626
|
August 13, 2020
|
|
sPLS-DA prediction problem
|
|
4
|
123
|
August 11, 2020
|
|
VIP by groups in PLS-DA
|
|
5
|
101
|
August 10, 2020
|
|
Comparing PCA/mixOmics tools with other methods
|
|
2
|
81
|
August 7, 2020
|
|
Explained covariance?
|
|
1
|
62
|
August 5, 2020
|
|
Positive and Negative Q2
|
|
1
|
125
|
August 5, 2020
|
|
DIABLO perf & tuning
|
|
4
|
162
|
July 23, 2020
|
|
PLS Loadings versus Weights
|
|
1
|
68
|
July 22, 2020
|
|
How to select the optimal number of variables for sPLS-DA and comparison with Selbal
|
|
4
|
98
|
July 1, 2020
|
|
Transformation for Cytometry Data
|
|
1
|
65
|
June 26, 2020
|
|
Small samples and non omics
|
|
4
|
130
|
June 17, 2020
|
|
Non matching samples nor time points
|
|
1
|
69
|
June 15, 2020
|
